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NeoBio API
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Package neobio.textui

Command line based tools to run the algorithms provided by other packages.

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          Description

Class Summary
NeoBio This class is a simple command line based utility for computing pairwise sequence alignments using one of the the algorithms provided in the neobio.alignment package.
RandomFactorSequenceGenerator This class is a simple command line based utility for generating random sequences with optimal LZ78 factorisation.
RandomSequenceGenerator This class is a simple command line based utility for generating random sequences.
 

Package neobio.textui Description

Command line based tools to run the algorithms provided by other packages.

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http://neobio.sourceforge.net
NeoBio is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. NeoBio is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with NeoBio; if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307, USA.