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neobio.alignment
Class InvalidScoringMatrixException

java.lang.Object
  |
  +--java.lang.Throwable
        |
        +--java.lang.Exception
              |
              +--neobio.alignment.InvalidScoringMatrixException
All Implemented Interfaces:
java.io.Serializable
public class InvalidScoringMatrixException
extends java.lang.Exception

Signals that the substitution matrix does not comply with the specification (see ScoringMatrix for details).

Author:
Sergio A. de Carvalho Jr.
See Also:
ScoringMatrix, Serialized Form

Field Summary
 
Fields inherited from class java.lang.Exception
 
Fields inherited from class java.lang.Throwable
 
Constructor Summary
InvalidScoringMatrixException()
          Constructs an InvalidScoringMatrixException with null as its error detail message.
InvalidScoringMatrixException(java.lang.String message)
          Constructs an InvalidScoringMatrixException with the specified detail message.
InvalidScoringMatrixException(java.lang.String message, java.lang.Throwable cause)
          Constructs an InvalidScoringMatrixException with the specified detail message and cause.
InvalidScoringMatrixException(java.lang.Throwable cause)
          Constructs an InvalidScoringMatrixException with the specified cause (and a detail message that typically contains the class and detail message of cause).
 
Methods inherited from class java.lang.Throwable
fillInStackTrace, getCause, getLocalizedMessage, getMessage, getStackTrace, initCause, printStackTrace, printStackTrace, printStackTrace, setStackTrace, toString
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
 

Constructor Detail

InvalidScoringMatrixException

public InvalidScoringMatrixException()
Constructs an InvalidScoringMatrixException with null as its error detail message.

InvalidScoringMatrixException

public InvalidScoringMatrixException(java.lang.String message)
Constructs an InvalidScoringMatrixException with the specified detail message.

Parameters:
message - an error message

InvalidScoringMatrixException

public InvalidScoringMatrixException(java.lang.Throwable cause)
Constructs an InvalidScoringMatrixException with the specified cause (and a detail message that typically contains the class and detail message of cause).

Parameters:
cause - a cause

InvalidScoringMatrixException

public InvalidScoringMatrixException(java.lang.String message,
                                     java.lang.Throwable cause)
Constructs an InvalidScoringMatrixException with the specified detail message and cause.

Parameters:
message - an error message
cause - a cause
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NeoBio is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. NeoBio is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with NeoBio; if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307, USA.